STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527135_00720Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000527135_00421
Unannotated protein.
 
 
 0.979
GCA_000527135_00957
Unannotated protein.
 
 0.974
GCA_000527135_01626
Unannotated protein.
 
 
 0.960
GCA_000527135_03097
Unannotated protein.
  
 
 0.928
GCA_000527135_01113
Unannotated protein.
      0.869
GCA_000527135_00717
Unannotated protein.
  
 0.857
GCA_000527135_00721
Unannotated protein.
       0.803
GCA_000527135_01856
Unannotated protein.
  
 
 0.797
GCA_000527135_03748
Unannotated protein.
    
  0.754
GCA_000527135_00420
Unannotated protein.
 
 
 0.753
Your Current Organism:
Methyloversatilis discipulorum
NCBI taxonomy Id: 1119528
Other names: Burkholderiales bacterium FAM1, Burkholderiales bacterium RZ18-153, JCM 30542, M. discipulorum, Methyloversatilis discipulorum Smalley et al. 2015, Methyloversatilis sp. FAM1, Methyloversatilis sp. RZ18-153, Rhodocyclaceae bacterium RZ94, VKM B-2888, strain FAM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.