STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000527135_02849Unannotated protein. (254 aa)    
Predicted Functional Partners:
GCA_000527135_02850
Unannotated protein.
 
     0.813
GCA_000527135_02131
Unannotated protein.
   
 
 0.795
GCA_000527135_03242
Unannotated protein.
    
  0.794
GCA_000527135_02848
Unannotated protein.
  
  
 0.744
GCA_000527135_01700
Unannotated protein.
 
 
 0.683
GCA_000527135_02426
Unannotated protein.
    
 0.641
GCA_000527135_00002
Unannotated protein.
   
 
 0.635
GCA_000527135_01046
Unannotated protein.
  
     0.620
GCA_000527135_02294
Unannotated protein.
    
 
 0.532
GCA_000527135_02163
Unannotated protein.
    
 
 0.529
Your Current Organism:
Methyloversatilis discipulorum
NCBI taxonomy Id: 1119528
Other names: Burkholderiales bacterium FAM1, Burkholderiales bacterium RZ18-153, JCM 30542, M. discipulorum, Methyloversatilis discipulorum Smalley et al. 2015, Methyloversatilis sp. FAM1, Methyloversatilis sp. RZ18-153, Rhodocyclaceae bacterium RZ94, VKM B-2888, strain FAM1
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