STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001202035_00937Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_001202035_02253
Unannotated protein.
 
  
 0.902
GCA_001202035_01635
Unannotated protein.
   
    0.863
GCA_001202035_02033
Unannotated protein.
   
    0.863
GCA_001202035_00938
Unannotated protein.
       0.817
GCA_001202035_00334
Unannotated protein.
   
    0.711
GCA_001202035_00936
Unannotated protein.
   
   0.660
GCA_001202035_00935
Unannotated protein.
       0.574
GCA_001202035_03475
Unannotated protein.
  
    0.508
GCA_001202035_00353
Unannotated protein.
   
    0.469
GCA_001202035_03010
Unannotated protein.
 
 
   0.431
Your Current Organism:
Pseudorhodobacter wandonensis
NCBI taxonomy Id: 1120568
Other names: CCUG 61506, KCTC 23672, P. wandonensis, Pseudorhodobacter sp. WT-MW11, Pseudorhodobacter wandonensis Lee et al. 2013, strain WT-MW11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.