STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_18424G domain-containing protein. (572 aa)    
Predicted Functional Partners:
H257_09986
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.917
B5M09_007222
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.915
H257_06432
Uncharacterized protein.
  
 
 0.914
H257_16209
Uncharacterized protein.
   
 0.903
H257_04984
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.894
B5M09_000065
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.862
B5M09_005983
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.835
B5M09_004621
Ribosomal protein L25, Ctc-form.
   
   0.835
H257_00059
Malonyl CoA-acyl carrier protein transacylase.
   
   0.835
H257_06763
Uncharacterized protein.
   
 
 0.819
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.