STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_007927RING-type domain-containing protein. (350 aa)    
Predicted Functional Partners:
H257_14937
Uncharacterized protein.
   
 
 0.473
B5M09_012894
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
   0.463
H257_09165
Uncharacterized protein.
   
  
 0.461
H257_17293
Uncharacterized protein.
     
 0.449
H257_17556
ThiF domain-containing protein.
     
 0.449
H257_15383
ThiF domain-containing protein.
     
 0.449
H257_04830
ThiF domain-containing protein.
     
 0.449
H257_18876
Uncharacterized protein.
    
 
 0.416
H257_12898
Uncharacterized protein.
    
 
 0.416
H257_01604
Uncharacterized protein.
    
 
 0.416
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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