STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_16941G_PROTEIN_RECEP_F3_4 domain-containing protein. (484 aa)    
Predicted Functional Partners:
H257_16940
Uncharacterized protein.
 
  
 0.882
B5M09_003539
Uncharacterized protein.
    
 0.869
B5M09_007311
WD_REPEATS_REGION domain-containing protein.
    
 0.863
H257_17282
Uncharacterized protein.
    
 0.761
H257_13782
Uncharacterized protein.
    
 0.761
H257_17698
Uncharacterized protein.
    
 0.584
H257_15377
Uncharacterized protein.
    
 0.584
H257_15338
Uncharacterized protein.
    
 0.584
H257_15378
Uncharacterized protein.
    
 0.584
H257_03495
Uncharacterized protein.
    
 0.584
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.