STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_1721340S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)    
Predicted Functional Partners:
B5M09_012614
Ribosomal protein S4; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
DYB35_012096
S10_plectin domain-containing protein.
   
 0.999
B5M09_011593
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.999
B5M09_007026
40S ribosomal protein S20.
  
 0.999
H257_15634
40S ribosomal protein S27.
   
 0.999
B5M09_002921
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.999
B5M09_010030
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
H257_13479
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
B5M09_011313
Uncharacterized protein.
   
 0.999
H257_11734
40S ribosomal protein S28.
   
 0.999
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.