STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_17170Epimerase domain-containing protein. (368 aa)    
Predicted Functional Partners:
B5M09_000638
Uncharacterized protein.
   
 
 0.957
DYB37_007465
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.951
H257_00370
Farnesyl-diphosphate farnesyltransferase.
  
 
 0.947
H257_13901
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.941
B5M09_004053
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
   
 0.872
H257_04494
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.858
H257_02062
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.843
B5M09_000329
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.841
H257_16604
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.836
B5M09_011659
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.836
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.