STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_16373Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
DYB26_001434
Helicase ATP-binding domain-containing protein.
    
  0.808
H257_10110
Uncharacterized protein.
    
  0.808
H257_13755
DIRP domain-containing protein.
    
  0.557
H257_01932
dUTPase domain-containing protein.
    
  0.551
H257_15813
Histone-binding protein RBBP4.
    
  0.545
H257_02446
Uncharacterized protein.
     
 0.532
H257_03813
Replication protein A subunit.
    
 0.496
B5M09_008443
MPN domain-containing protein.
    
  0.449
B5M09_006225
RPA_C domain-containing protein.
    
  0.435
H257_10476
SAS-6_N domain-containing protein.
    
  0.435
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.