STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_16363PseudoU_synth_2 domain-containing protein. (312 aa)    
Predicted Functional Partners:
H257_07103
Iojap-like ribosome-associated protein.
  
 
 0.732
B5M09_008636
Ribosomal protein L21.
   
   0.692
B5M09_009562
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.691
H257_03482
tRNA modification GTPase TrmE; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
 
 0.660
H257_00383
Ribosome-associated GTPase EngA.
   
 
 0.660
H257_11707
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.659
H257_00153
Ribosome biogenesis GTP-binding protein YsxC.
   
 
 0.658
H257_17545
60S ribosomal protein.
   
   0.650
H257_06188
TRUD domain-containing protein.
    
 
 0.643
H257_00413
TRUD domain-containing protein.
    
 
 0.643
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.