STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_16742Uncharacterized protein. (576 aa)    
Predicted Functional Partners:
B5M09_003094
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.880
B5M09_000329
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
   0.776
H257_09171
SAP domain-containing protein.
   
 0.764
B5M09_007026
40S ribosomal protein S20.
   
   0.761
H257_01092
RanBP2-type domain-containing protein.
   
  0.760
H257_00560
RRM domain-containing protein.
   
  0.760
H257_11774
Uncharacterized protein.
    
 0.751
B5M09_007942
40S ribosomal protein S14.
   
   0.751
B5M09_010738
C3H1-type domain-containing protein.
    
 0.751
H257_08168
GST_C domain-containing protein.
   
 
 0.746
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.