STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_16577Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
H257_18632
Uncharacterized protein.
   
    0.791
H257_01817
Uncharacterized protein.
   
  
 0.752
H257_13338
WD_REPEATS_REGION domain-containing protein.
   
   0.751
H257_03511
Uncharacterized protein.
   
    0.736
H257_03512
B2-adapt-app_C domain-containing protein.
   
    0.736
B5M09_006563
Uncharacterized protein.
   
    0.730
B5M09_007343
RRM domain-containing protein.
   
    0.728
H257_07357
Uncharacterized protein.
   
    0.719
H257_06227
Brix domain-containing protein.
   
   0.690
H257_11736
NUC153 domain-containing protein.
   
    0.685
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.