STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_15850USP domain-containing protein; Belongs to the peptidase C19 family. (376 aa)    
Predicted Functional Partners:
H257_03055
WD_REPEATS_REGION domain-containing protein.
    
 0.914
H257_11344
Ubiquitin-60S ribosomal protein L40.
    
 0.820
H257_14937
Uncharacterized protein.
    
 0.814
H257_05225
Uncharacterized protein.
    
 0.807
B5M09_012894
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.780
H257_14602
Ubiquitin-like domain-containing protein.
    
  0.778
H257_11425
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.778
H257_07035
Ubiquitin-40S ribosomal protein S27a.
    
  0.778
H257_02556
Polyubiquitin.
    
  0.778
H257_12588
Uncharacterized protein.
    
  0.703
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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