STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_15396Uncharacterized protein. (2844 aa)    
Predicted Functional Partners:
B5M09_004925
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.581
H257_02911
Uncharacterized protein.
     
 0.521
H257_02693
Uncharacterized protein.
     
0.469
H257_03712
Fibronectin type-III domain-containing protein.
    
 
 0.462
H257_16069
Uncharacterized protein.
      
 0.448
H257_13502
Uncharacterized protein.
      
 0.448
H257_01137
Uncharacterized protein.
      
 0.448
H257_18000
Uncharacterized protein.
    
  0.424
H257_12442
Uncharacterized protein.
    
  0.424
H257_11720
Uncharacterized protein.
    
  0.424
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.