STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_15554ATP-dependent chaperone ClpB; Belongs to the ClpA/ClpB family. (897 aa)    
Predicted Functional Partners:
H257_14033
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.977
B5M09_012144
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.912
H257_00287
Uncharacterized protein.
  
 
 0.873
H257_09465
Uncharacterized protein.
  
 
 0.837
B5M09_006851
Chaperone DnaK; Belongs to the heat shock protein 70 family.
  
 
 0.837
H257_16484
Uncharacterized protein.
  
 
 0.836
H257_04453
Uncharacterized protein.
  
 
 0.817
DYB25_012709
Chaperone DnaK; Belongs to the heat shock protein 70 family.
  
 
 0.813
H257_18082
Uncharacterized protein.
  
 
 0.813
H257_17322
Hsp70-like protein; Belongs to the heat shock protein 70 family.
  
 
 0.813
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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