STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_14937Uncharacterized protein. (1297 aa)    
Predicted Functional Partners:
H257_05225
Uncharacterized protein.
   
 0.998
DYB26_001434
Helicase ATP-binding domain-containing protein.
   
 0.986
H257_10110
Uncharacterized protein.
   
 0.986
H257_15489
RING-type domain-containing protein.
    
 0.985
B5M09_010936
Uncharacterized protein.
    
 0.977
H257_07212
Uncharacterized protein.
   
 0.973
H257_09335
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.954
H257_11344
Ubiquitin-60S ribosomal protein L40.
    
  0.944
B5M09_008443
MPN domain-containing protein.
    
 0.924
H257_09279
NTF2 domain-containing protein.
   
 0.885
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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