STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_13920Uncharacterized protein. (549 aa)    
Predicted Functional Partners:
H257_05857
WD_REPEATS_REGION domain-containing protein.
    
 
 0.922
DYB25_008069
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.785
H257_15886
Tubulin alpha chain.
   
 0.785
H257_13944
Tubulin_C domain-containing protein.
   
 0.785
H257_08698
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
   
 0.785
H257_08697
Tubulin alpha chain.
   
 0.785
H257_06355
Uncharacterized protein.
    
   0.757
H257_04977
Enkurin domain-containing protein.
   
 
 0.682
H257_13782
Uncharacterized protein.
  
 
   0.662
H257_17064
Uncharacterized protein; Belongs to the actin family.
   
 0.653
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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