STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_14138WD_REPEATS_REGION domain-containing protein. (909 aa)    
Predicted Functional Partners:
H257_17793
DNA polymerase.
   
 
 0.997
H257_05417
DNA helicase; Belongs to the MCM family.
   
 
 0.997
H257_01595
MCM domain-containing protein; Belongs to the MCM family.
   
 
 0.994
H257_09165
Uncharacterized protein.
   
 
 0.993
H257_11372
DNA helicase; Belongs to the MCM family.
   
 
 0.992
B5M09_009636
Sld5 domain-containing protein.
   
 
 0.989
H257_09462
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
   
 
 0.987
H257_07206
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.
   
 
 0.987
B5M09_002288
Uncharacterized protein.
   
 
 0.987
H257_17620
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
 
 0.986
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.