STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_13662AAA domain-containing protein. (334 aa)    
Predicted Functional Partners:
H257_08252
AAA domain-containing protein.
  
0.997
H257_11880
AAA domain-containing protein.
  
0.991
B5M09_005479
Uncharacterized protein.
   
0.990
H257_02727
UmuC domain-containing protein.
  
 0.986
B5M09_012894
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.984
H257_02339
Uncharacterized protein.
    
 0.975
H257_01048
Uncharacterized protein.
   
 0.971
H257_04554
Replication factor C subunit 1.
   
0.968
H257_16207
AAA domain-containing protein.
   
 0.966
H257_03452
Checkpoint protein; Belongs to the HUS1 family.
    
 0.964
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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