STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_13344Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
H257_11707
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.894
H257_01767
Tryptophan synthase, alpha subunit; Belongs to the TrpA family.
  
 
 0.868
H257_00119
Tryptophan synthase, beta subunit.
  
 
 0.868
H257_17844
Carrier domain-containing protein.
 0.766
H257_07004
ACPS domain-containing protein.
 
 0.755
H257_13293
AMP-binding domain-containing protein.
 
 0.688
H257_15614
AMP-binding domain-containing protein.
  
 0.617
H257_14455
Uncharacterized protein.
  
 0.617
H257_14454
Uncharacterized protein.
  
 0.617
H257_09251
Uncharacterized protein.
  
0.617
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.