STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_12855HECT domain-containing protein. (327 aa)    
Predicted Functional Partners:
H257_11344
Ubiquitin-60S ribosomal protein L40.
    
 0.758
H257_12121
Uncharacterized protein.
   
 
0.689
H257_05561
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
    
 0.546
H257_05090
E2_bind domain-containing protein.
    
 0.520
H257_16784
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
  
 
   0.518
H257_16788
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
  
 
   0.511
H257_16787
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
  
 
   0.511
H257_10025
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.506
B5M09_007734
14-3-3-like protein; Belongs to the 14-3-3 family.
  
 
   0.487
H257_12588
Uncharacterized protein.
   
  0.482
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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