STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_12739Alpha-carbonic anhydrase domain-containing protein. (127 aa)    
Predicted Functional Partners:
H257_06227
Brix domain-containing protein.
   
 
 0.704
H257_14942
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.641
B5M09_000157
Ribosomal_L18_c domain-containing protein.
    
 
 0.633
H257_14141
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.603
B5M09_002247
WD_REPEATS_REGION domain-containing protein.
   
  
 0.529
H257_00415
Brix domain-containing protein.
   
    0.515
B5M09_002938
PUM-HD domain-containing protein.
   
    0.487
H257_08192
Uncharacterized protein.
   
    0.472
B5M09_007275
DNA-binding protein, 42 kDa.
   
    0.463
B5M09_001293
Bms1-type G domain-containing protein.
   
  
 0.460
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.