STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_12167PEK protein kinase. (1174 aa)    
Predicted Functional Partners:
B5M09_010335
S1 motif domain-containing protein.
   
 0.960
H257_14077
ATP phosphoribosyltransferase.
  
 0.824
B5M09_000096
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.720
H257_18893
Uncharacterized protein.
  
 
 0.697
H257_15870
Uncharacterized protein.
  
 
 0.697
H257_10141
Uncharacterized protein.
  
 
 0.697
B5M09_005463
eIF2B_5 domain-containing protein.
   
 0.652
H257_03652
Tr-type G domain-containing protein.
   
 0.651
H257_00698
Aspartate-tRNA ligase.
  
  
 0.650
H257_18373
WD_REPEATS_REGION domain-containing protein.
    
 0.641
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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