STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_11181Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
B5M09_004925
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.991
H257_12121
Uncharacterized protein.
   
 0.964
H257_11344
Ubiquitin-60S ribosomal protein L40.
   
 0.877
H257_09036
ANK_REP_REGION domain-containing protein.
    
 0.874
H257_10779
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.873
DYB26_001434
Helicase ATP-binding domain-containing protein.
    
 0.846
H257_10110
Uncharacterized protein.
    
 0.846
H257_02728
RING-type domain-containing protein.
    
 0.839
B5M09_002013
E3 ubiquitin-protein ligase RBX1.
    
 0.837
H257_06338
Uncharacterized protein.
    
 0.830
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.