STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_10674Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance. (390 aa)    
Predicted Functional Partners:
H257_12784
BUD32 protein kinase.
  
 0.974
H257_09889
YjeE family ATPase.
  
 0.965
H257_18290
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
    
 0.885
B5M09_011064
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
    
 0.885
H257_12112
Uncharacterized protein; Belongs to the CGI121/TPRKB family.
    
 0.885
H257_02360
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
  
 
 0.820
H257_01773
Dephospho-CoA kinase.
    
 0.689
H257_10323
Glycerol-3-phosphate dehydrogenase [NAD(+)].
      0.663
H257_05211
MTS domain-containing protein.
   
 0.621
H257_04283
LMWPc domain-containing protein.
    
  0.617
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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