STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_10217DDHD domain-containing protein. (564 aa)    
Predicted Functional Partners:
H257_08587
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.738
H257_06393
WD_REPEATS_REGION domain-containing protein.
    
 0.719
H257_02942
WD_REPEATS_REGION domain-containing protein.
    
 0.719
H257_08248
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.673
H257_02541
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.673
H257_06216
Uncharacterized protein.
     
 0.636
H257_16985
Uncharacterized protein; Belongs to the synaptobrevin family.
     
 0.624
H257_13336
Uncharacterized protein.
   
 
 0.613
H257_03626
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.606
B5M09_006603
t-SNARE coiled-coil homology domain-containing protein.
   
 
  0.585
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.