STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_006057Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
B5M09_000418
Diaminopimelate epimerase, variant.
    
 0.641
B5M09_010789
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.512
H257_05001
Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.512
H257_02561
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.512
H257_01541
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.512
H257_05744
Uncharacterized protein.
    
  0.485
H257_05745
M20_dimer domain-containing protein.
    
  0.485
H257_01959
M20_dimer domain-containing protein.
    
  0.485
H257_02191
WD_REPEATS_REGION domain-containing protein.
    
  0.485
H257_17564
Uncharacterized protein.
  
  
 0.445
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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