STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_10320Alkyl transferase; Belongs to the UPP synthase family. (332 aa)    
Predicted Functional Partners:
H257_09675
Ribosome recycling factor.
  
  
 0.878
H257_00568
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
   
 0.860
B5M09_008869
Isopentenyl-diphosphate delta-isomerase.
  
 
 0.857
H257_02480
Peptidase_M50 domain-containing protein.
  
  
 0.837
H257_01501
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.834
H257_09712
Uncharacterized protein.
     
 0.833
H257_16017
Uncharacterized protein.
     
 0.832
H257_15108
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.829
H257_11297
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.821
H257_00370
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.802
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.