STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_10116Cog4 domain-containing protein. (801 aa)    
Predicted Functional Partners:
H257_06502
Uncharacterized protein.
   
 0.974
H257_05101
Uncharacterized protein.
    
 0.974
H257_11289
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.972
H257_05897
Uncharacterized protein.
   
 0.969
H257_18662
Uncharacterized protein.
    
 0.963
H257_13328
Uncharacterized protein.
    
 0.962
H257_03490
Uncharacterized protein.
    
 0.962
H257_03898
Uncharacterized protein.
    
 0.779
H257_09138
t-SNARE coiled-coil homology domain-containing protein.
    
 0.775
H257_07702
t-SNARE coiled-coil homology domain-containing protein.
    
 0.775
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.