STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_10482ABC transporter domain-containing protein. (1030 aa)    
Predicted Functional Partners:
H257_07404
HTH myb-type domain-containing protein.
    
 0.587
H257_19527
Uncharacterized protein.
 
     0.545
H257_08082
ATP-synt_ab domain-containing protein.
    
   0.505
H257_07072
ATP synthase subunit gamma.
   
   0.486
B5M09_010769
ATP-synt_DE_N domain-containing protein.
    
   0.465
B5M09_007958
Uncharacterized protein.
    
 0.437
H257_16793
PPM-type phosphatase domain-containing protein.
  
 
  0.436
H257_02501
AGC protein kinase.
  
 
  0.436
H257_00748
AGC protein kinase.
  
 
  0.436
H257_16987
Uncharacterized protein.
    
 0.426
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.