STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_10476SAS-6_N domain-containing protein. (406 aa)    
Predicted Functional Partners:
DYB26_001434
Helicase ATP-binding domain-containing protein.
   
 0.998
H257_10110
Uncharacterized protein.
   
 0.998
H257_03813
Replication protein A subunit.
   
 0.983
H257_02727
UmuC domain-containing protein.
   
 
 0.979
H257_07673
Uncharacterized protein.
    
 0.960
H257_03496
H15 domain-containing protein.
    
 0.953
H257_06268
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.944
H257_04552
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.917
H257_09626
Uncharacterized protein.
   
 0.909
H257_08389
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
   
 0.909
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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