STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_010840Uncharacterized protein. (425 aa)    
Predicted Functional Partners:
H257_13610
Uncharacterized protein.
    
 0.814
H257_18858
Uncharacterized protein.
    
 0.808
H257_12780
Uncharacterized protein.
    
 0.808
H257_02619
Uncharacterized protein.
    
 0.808
B5M09_004885
Uncharacterized protein.
    
 0.766
B5M09_007942
40S ribosomal protein S14.
    
  0.762
B5M09_000329
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 0.755
B5M09_005900
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.754
B5M09_007026
40S ribosomal protein S20.
    
  0.745
H257_15813
Histone-binding protein RBBP4.
    
 0.742
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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