H257_09028 protein (Aphanomyces astaci) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H257_09028

Uncharacterized protein. (556 aa)

Predicted Functional Partners:

B5M09_005217

0.948

H257_07072

0.940

H257_08082

0.939

H257_04657

0.931

H257_07984

0.924

H257_17225

0.923

H257_14770

0.923

H257_17085

0.899

B5M09_010360

0.898

B5M09_010769

0.890

Your Current Organism:

Aphanomyces astaci

NCBI taxonomy Id: 112090
Other names: A. astaci

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5M09_005217	B5M09_010360	W4H9Q2	W4FIG9	ATP synthase F1, delta subunit.	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.594
B5M09_005217	B5M09_010769	W4H9Q2	W4H182	ATP synthase F1, delta subunit.	ATP-synt_DE_N domain-containing protein.	0.999
B5M09_005217	H257_04657	W4H9Q2	W4GVD0	ATP synthase F1, delta subunit.	V-type ATPase, C subunit; Belongs to the V-ATPase proteolipid subunit family.	0.997
B5M09_005217	H257_07072	W4H9Q2	W4GLS6	ATP synthase F1, delta subunit.	ATP synthase subunit gamma.	0.999
B5M09_005217	H257_07984	W4H9Q2	W4GHL1	ATP synthase F1, delta subunit.	Uncharacterized protein.	0.685
B5M09_005217	H257_08082	W4H9Q2	W4GFY0	ATP synthase F1, delta subunit.	ATP-synt_ab domain-containing protein.	0.999
B5M09_005217	H257_09028	W4H9Q2	W4GCZ3	ATP synthase F1, delta subunit.	Uncharacterized protein.	0.948
B5M09_005217	H257_14770	W4H9Q2	W4FRS5	ATP synthase F1, delta subunit.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.715
B5M09_005217	H257_17085	W4H9Q2	W4FIE4	ATP synthase F1, delta subunit.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.829
B5M09_005217	H257_17225	W4H9Q2	W4FFF0	ATP synthase F1, delta subunit.	V-type ATPase, A subunit.	0.693
B5M09_010360	B5M09_005217	W4FIG9	W4H9Q2	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	ATP synthase F1, delta subunit.	0.594
B5M09_010360	B5M09_010769	W4FIG9	W4H182	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	ATP-synt_DE_N domain-containing protein.	0.559
B5M09_010360	H257_04657	W4FIG9	W4GVD0	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	V-type ATPase, C subunit; Belongs to the V-ATPase proteolipid subunit family.	0.429
B5M09_010360	H257_07072	W4FIG9	W4GLS6	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	ATP synthase subunit gamma.	0.600
B5M09_010360	H257_08082	W4FIG9	W4GFY0	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	ATP-synt_ab domain-containing protein.	0.857
B5M09_010360	H257_09028	W4FIG9	W4GCZ3	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	Uncharacterized protein.	0.898
B5M09_010360	H257_14770	W4FIG9	W4FRS5	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.459
B5M09_010360	H257_17085	W4FIG9	W4FIE4	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.580
B5M09_010360	H257_17225	W4FIG9	W4FFF0	Plasma-membrane proton-efflux P-type ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	V-type ATPase, A subunit.	0.475
B5M09_010769	B5M09_005217	W4H182	W4H9Q2	ATP-synt_DE_N domain-containing protein.	ATP synthase F1, delta subunit.	0.999