STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_08940Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
H257_15813
Histone-binding protein RBBP4.
   
 0.803
H257_05676
MRG domain-containing protein.
    
 0.750
H257_12999
Uncharacterized protein.
    
 0.721
H257_12622
Uncharacterized protein.
    
 0.721
H257_11018
Uncharacterized protein.
    
 0.700
H257_11344
Ubiquitin-60S ribosomal protein L40.
    
  0.667
B5M09_012082
HSF_DOMAIN domain-containing protein.
    
 0.649
B5M09_010180
Histone H2A; Belongs to the histone H2A family.
   
 0.647
H257_05386
Uncharacterized protein.
    
 0.644
B5M09_008072
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
  0.635
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.