STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_08674Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (489 aa)    
Predicted Functional Partners:
H257_03164
Uncharacterized protein.
  
 0.943
B5M09_010515
Uncharacterized protein.
  
 0.943
B5M09_008635
Adenosylhomocysteinase.
  
 0.928
H257_05578
Cystathionine beta-lyase.
 
 0.912
H257_10176
Homoserine O-acetyltransferase.
  
 0.911
H257_02401
Uncharacterized protein.
 
 0.911
B5M09_012161
Uncharacterized protein.
 
 0.911
B5M09_000637
Uncharacterized protein.
 
 0.911
B5M09_004812
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.907
B5M09_001094
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.907
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.