STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_008085Autophagy-related protein. (124 aa)    
Predicted Functional Partners:
H257_01748
Uncharacterized protein.
   
 0.999
H257_05561
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.998
H257_07154
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
  
 0.997
B5M09_011388
Autophagy-related protein 3.
  
 0.997
B5M09_000014
ZZ-type domain-containing protein.
   
 0.978
H257_17156
ULK/ULK protein kinase.
   
 0.952
H257_17155
ATG11 domain-containing protein.
   
 0.952
H257_08571
ULK/ULK protein kinase.
   
 0.952
H257_01931
Serine/threonine protein kinase.
   
 0.952
H257_11003
Ubiquitin-like protein ATG12.
   
 0.934
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.