STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_002240W2 domain-containing protein. (709 aa)    
Predicted Functional Partners:
H257_10377
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
H257_00335
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
B5M09_005463
eIF2B_5 domain-containing protein.
   
 0.998
B5M09_012583
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.998
DYB25_003386
NTP_transferase domain-containing protein.
   
 0.998
B5M09_010335
S1 motif domain-containing protein.
   
 0.997
B5M09_000096
Eukaryotic translation initiation factor 2 subunit 3.
    
 0.997
H257_03652
Tr-type G domain-containing protein.
    
 0.848
H257_05046
RBR-type E3 ubiquitin transferase.
 
      0.803
B5M09_010865
RBR-type E3 ubiquitin transferase.
 
      0.795
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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