STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_07586DDE_Tnp_IS1595 domain-containing protein. (128 aa)    
Predicted Functional Partners:
H257_00322
DNA_mis_repair domain-containing protein.
    
 0.803
H257_17770
Uncharacterized protein.
  
 0.763
H257_13519
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.763
B5M09_000143
Uncharacterized protein.
  
 0.763
H257_17128
Uncharacterized protein.
  
 0.762
H257_15372
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.762
H257_00367
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.762
H257_04990
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.737
B5M09_012894
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.708
H257_16608
Uncharacterized protein.
   
 0.652
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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