STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_006755Uncharacterized protein. (617 aa)    
Predicted Functional Partners:
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
  0.784
H257_02359
UBX domain-containing protein.
    
 0.723
H257_17329
UBX domain-containing protein.
    
 
 0.627
H257_08782
Uncharacterized protein.
   
 
 0.618
H257_15946
Uncharacterized protein.
    
 
 0.600
H257_15945
WD_REPEATS_REGION domain-containing protein.
    
 
 0.600
H257_04265
Uncharacterized protein.
   
  0.595
H257_18355
Uncharacterized protein.
    
 0.588
H257_16736
PUB domain-containing protein.
    
 0.588
H257_15612
UBX domain-containing protein.
    
 0.588
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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