STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_06513Uncharacterized protein. (1952 aa)    
Predicted Functional Partners:
H257_16546
Uncharacterized protein.
    
 0.831
H257_11823
CSD_1 domain-containing protein.
    
 0.831
H257_11821
Uncharacterized protein.
    
 0.831
B5M09_005881
KHA domain-containing protein.
    
 0.831
H257_07535
Uncharacterized protein.
    
 0.831
H257_04378
Rap-GAP domain-containing protein.
   
0.785
DYB35_010749
Uncharacterized protein.
    
 0.757
H257_08540
Uncharacterized protein.
   
 0.675
H257_04998
Uncharacterized protein.
   
 0.675
H257_03621
Uncharacterized protein.
   
 0.675
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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