STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_007482Uncharacterized protein. (235 aa)    
Predicted Functional Partners:
H257_04855
Uncharacterized protein.
   
 0.822
H257_04860
Uncharacterized protein.
   
 0.822
H257_04864
Uncharacterized protein.
   
 0.822
H257_04862
Uncharacterized protein.
   
 0.822
H257_01780
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.822
B5M09_009796
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.822
H257_00218
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.822
H257_12043
Aha1_N domain-containing protein.
   
 
 0.596
H257_08433
MYND-type domain-containing protein.
   
 
 0.596
H257_04691
Uncharacterized protein.
   
 
 0.564
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.