STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_006041Uncharacterized protein. (931 aa)    
Predicted Functional Partners:
B5M09_002233
G-patch_2 domain-containing protein.
    
 0.957
H257_17896
WD_REPEATS_REGION domain-containing protein.
   
 0.950
H257_13622
Uncharacterized protein.
    
 0.946
H257_04540
MI domain-containing protein.
   
 0.942
H257_14935
Uncharacterized protein.
   
 0.936
H257_01432
PHD finger-like domain-containing protein 5A.
    
 0.929
H257_17171
Uncharacterized protein.
   
 0.928
B5M09_009955
PSP domain-containing protein.
   
 0.924
H257_10300
Uncharacterized protein.
  
 
0.922
H257_08878
CPSF_A domain-containing protein.
   
 0.922
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.