STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_02805PCI domain-containing protein. (449 aa)    
Predicted Functional Partners:
B5M09_004276
PCI domain-containing protein.
  
 0.999
H257_03969
PCI domain-containing protein.
   
 0.999
H257_08538
MPN domain-containing protein.
   
 0.998
H257_04625
CSN8_PSD8_EIF3K domain-containing protein.
   
 0.998
H257_16509
PCI domain-containing protein.
  
 
 0.993
H257_16473
PCI domain-containing protein.
   
 0.986
H257_00154
PCI domain-containing protein.
   
 0.986
DYB25_007407
MPN domain-containing protein.
   
 0.984
H257_07502
Uncharacterized protein.
   
 0.977
H257_02392
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.941
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.