STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B5M09_009796Uncharacterized protein; Belongs to the SKP1 family. (162 aa)    
Predicted Functional Partners:
H257_04422
Uncharacterized protein.
   
 0.967
B5M09_002013
E3 ubiquitin-protein ligase RBX1.
   
 0.866
H257_13788
Uncharacterized protein.
    
 0.857
H257_09357
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.838
B5M09_002572
60S ribosomal protein L8.
   
 0.831
H257_11344
Ubiquitin-60S ribosomal protein L40.
    
  0.823
B5M09_007482
Uncharacterized protein.
   
 0.822
H257_16076
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.801
H257_12555
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.801
H257_01175
Lipase_3 domain-containing protein.
    
 0.801
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.