STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_01817Uncharacterized protein. (436 aa)    
Predicted Functional Partners:
H257_18632
Uncharacterized protein.
   
 0.999
H257_13913
Uncharacterized protein; Belongs to the NOB1 family.
   
 0.999
B5M09_001293
Bms1-type G domain-containing protein.
   
 0.999
H257_16898
WD_REPEATS_REGION domain-containing protein.
   
 0.998
B5M09_005154
KH domain-containing protein.
   
 0.998
B5M09_010030
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.998
H257_13338
WD_REPEATS_REGION domain-containing protein.
   
 0.998
H257_12556
Uncharacterized protein.
   
 0.998
H257_12549
WD_REPEATS_REGION domain-containing protein.
   
 0.998
H257_11549
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 0.998
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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