STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_01945ABC transmembrane type-1 domain-containing protein. (348 aa)    
Predicted Functional Partners:
H257_19448
ABC transporter domain-containing protein.
 
      0.842
H257_17875
ABC transporter domain-containing protein.
 
      0.822
H257_07548
ABC transmembrane type-1 domain-containing protein.
 
     0.812
H257_18846
Uncharacterized protein.
 
     0.810
H257_16886
Uncharacterized protein.
 
     0.771
H257_19497
ABC transmembrane type-1 domain-containing protein.
 
     0.632
H257_01946
Uncharacterized protein.
 
     0.621
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.613
H257_17584
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.558
H257_19252
ABC transmembrane type-1 domain-containing protein.
 
      0.470
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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