STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_00461Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (859 aa)    
Predicted Functional Partners:
DYB31_013363
Uncharacterized protein.
    
 0.997
H257_15813
Histone-binding protein RBBP4.
    
 
 0.809
H257_14199
Uncharacterized protein.
    
 0.745
H257_10806
APH domain-containing protein.
    
 0.745
H257_06190
RRM domain-containing protein.
    
 0.745
H257_04631
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.745
H257_01029
Uncharacterized protein.
    
 0.745
B5M09_011875
Histone H3; Belongs to the histone H3 family.
    
 
 0.648
H257_07835
Histone H3.
    
 
 0.648
B5M09_007880
Histone domain-containing protein.
    
 
 0.648
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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