STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_00796C2H2-type domain-containing protein. (803 aa)    
Predicted Functional Partners:
B5M09_007026
40S ribosomal protein S20.
    
 
 0.513
DYB35_012096
S10_plectin domain-containing protein.
    
 
 0.490
B5M09_000221
Uncharacterized protein.
   
    0.485
H257_08464
Uncharacterized protein.
   
    0.485
H257_14973
Uncharacterized protein.
    
 
 0.480
H257_10472
Uncharacterized protein.
    
 
 0.480
H257_11839
Uncharacterized protein.
    
 
 0.470
H257_01796
Uncharacterized protein.
    
 
 0.470
H257_18893
Uncharacterized protein.
   
 
 0.467
H257_15870
Uncharacterized protein.
   
 
 0.467
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.