STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H257_00809Uncharacterized protein. (276 aa)    
Predicted Functional Partners:
H257_12368
Uncharacterized protein.
    
 
 0.830
H257_12607
N-acetyltransferase domain-containing protein.
   
 
 0.808
H257_05704
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.808
B5M09_011779
Signal peptidase I.
     
 0.793
H257_08503
Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.
    
 
 0.777
H257_01547
Uncharacterized protein.
    
 0.770
B5M09_000514
Serine-tRNA ligase.
     
 0.719
H257_06860
Serine-tRNA ligase.
     
 0.719
H257_13913
Uncharacterized protein; Belongs to the NOB1 family.
   
    0.702
H257_06611
Uncharacterized protein.
   
 
 0.675
Your Current Organism:
Aphanomyces astaci
NCBI taxonomy Id: 112090
Other names: A. astaci
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