STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA69393.1GHKL domain-containing protein. (247 aa)    
Predicted Functional Partners:
SFA69414.1
DNA-binding response regulator, LytR/AlgR family.
 
  
 0.954
SFA71783.1
DNA-binding response regulator, LytR/AlgR family.
 
  
 0.766
SFA76413.1
DNA-binding response regulator, LytR/AlgR family.
 
  
 0.716
SFB38614.1
Response regulator receiver domain-containing protein.
     
 0.693
SFB18307.1
Signal transduction histidine kinase.
   
 
 0.662
SFA86541.1
Signal transduction histidine kinase.
   
 
 0.631
SFB02383.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
 
 0.631
SFB12798.1
Signal transduction histidine kinase.
   
 
 0.631
SFB32743.1
Signal transduction histidine kinase.
   
 
 0.631
SFB06831.1
Signal transduction histidine kinase.
   
 
 0.609
Your Current Organism:
Acetitomaculum ruminis
NCBI taxonomy Id: 1120918
Other names: A. ruminis DSM 5522, Acetitomaculum ruminis DSM 5522
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.